| 1995 | Parrot Fish Eye | Mats Gustafsson | | 1 |
| 1996 | Blonk, Gustafsson & Zerang | Jaap Blonk, Mats Gustafsson & Michael Zerang | | 1 |
| 1996 | Gush Wachs | Mats Gustafsson, Sten Sandell, Raymond Strid, Philipp Wachsmann | | 1 |
| 1996 | Mouth Eating Trees and Related Activities | Mats Gustafsson / Barry Guy / Paul Lovens | | 1 |
| 1996 | Opus Apus | Anders Jormin, Mats Gustafsson, Christian Jormin | | 2 |
| 1996 | You forget to answer | Barry Guy, Mats Gustafsson & Raymond Strid | | 1 |
| 1997 | Impropositions | Mats Gustafsson | | 1 |
| 1997 | Frogging | Mats Gustafsson, Barry Guy | | 1 |
| 1998 | Background Music | Gregorio, Gustafsson, Nordeson | | 1 |
| 1998 | One to (Two)... | Günter Christmann & Mats Gustafsson | | 1 |
| 1999 | Apertura | David Grubbs & Mats Gustafsson | | 1 |
| 1999 | Xylophonen Virtuosen | Mats Gustafsson / Jim O’Rourke | | 2 |
| 1999 | The Education of Lars Jerry | Mats Gustafsson | | 1 |
| 2000 | New York - Ystad | Thurston Moore, Lee Ranaldo, Steve Shelley, Mats Gustafsson | | 1 |
| 2000 | Port Huron Picnic | Mats Gustafsson / Kurt Newman / Mike Gennaro | | 1 |
| 2000 | Windows: The Music of Steve Lacy | Mats Gustafsson | | 1 |
| 2001 | The Thing | Mats Gustafsson / Ingebrigt Håker Flaten / Paal Nilssen-Love | | 2 |
| 2002 | I Love It When You Snore | Paal Nilssen-Love & Mats Gustafsson | | 1 |
| 2003 | Off-Road | David Grubbs & Mats Gustafsson | | 2 |
| 2003 | Solos for Contrabass Saxophone | Mats Gustafsson | | 1 |
| 2004 | Hidros 3 | Mats Gustafsson / Sonic Youth | 1 | 2 |
| 2005 | How to Raise an Ox | Zu & Mats Gustafsson | | 4 |
| 2005 | Critical Mass | Agustí Fernández & Mats Gustafsson | | 1 |
| 2005 | Blues | Mats Gustafsson & David Stackenäs | | 1 |
| 2005 | Catapult | Mats Gustafsson | | 1 |
| 2007 | Words on the Floor | Mats Gustafsson & Yoshimi | | 2 |
| 2007 | Splatter | Paal Nilssen-Love / Mats Gustafsson | | 1 |
| 2008 | Cosmic Debris, Volume IV | My Cat Is an Alien / Mats Gustafsson | | 1 |
| 2008 | The Vilnius Implosion | Mats Gustafsson | | 1 |
| 2010 | TR!O | Christmann - Gustafsson - Lovens | | 1 |
| 2010 | Needs! | Mats Gustafsson | | 2 |
| 2010 | Barrel Fire | Gord Grdina Trio With Mats Gustafsson | | 1 |
| 2010 | Mother / Groundhog | Chris Corsano, Thurston Moore, Mats Gustafsson, Bill Nace | | 1 |
| 2011 | One Bird Two Bird | Akita / Gustafsson / O’Rourke | | 1 |
| 2011 | Kopros Lithos | Evans / Fernández / Gustafsson | | 1 |
| 2012 | Bengt | Mats Gustafsson | | 1 |
| 2012 | Baro 101 | Mats Gustafsson, Paal Nilssen-Love, Mesele Asmamaw | | 1 |
| 2013 | Cuts | Merzbow, Pándi & Gustaffson | | 3 |
| 2013 | Vi är alla Guds slavar | Mats Gustafsson / Thurston Moore | | 1 |
| 2013 | Verses | Vandermark / Gustafsson | | 1 |
| 2014 | Hidros6 | Mats Gustafsson & NU Ensemble | | 1 |
| 2014 | Torturing The Saxophone | Mats Gustafsson | | 1 |
| 2015 | Cuts of Guilt, Cuts Deeper | Merzbow, Mats Gustafsson, Thurston Moore & Balázs Pándi | | 3 |
| 2015 | Hit The Wall! | Mats Gustafsson & Thurston Moore | | 1 |
| 2015 | Piano Mating | Mats Gustafsson | | 1 |
| 2016 | Melt | Chippendale - Gustafsson - Pupillo | | 1 |
| 2016 | MG 50: Peace & Fire | Mats Gustafsson & Friends | | 1 |
| 2016 | This is From the Mouth | Mats Gustafsson | | 1 |
| 2017 | A Map of Guilt | Mats Gustafsson & Joachim Nordwall | | 2 |
| 2017 | Ljubljana | Mats Gustafsson, Craig Taborn | | 1 |
| 2017 | A Quietness of Water | Evans / Fernández / Gustafsson | | 1 |
| 2018 | Marvel Motor | Mats Gustafsson & Didi Kern | | 1 |
| 2018 | Sustain | Chaos Echœs with Mats Gustafsson | | 1 |
| 2019 | The Shithole Country & Boogie Band | The Shithole Country & Boogie Band Featuring Mats Gustafsson - Wendy Gondeln - Wolfgang Voigt | | 1 |
| 2020 | Countdown | Mats Gustafsson | | 1 |
| 2020 | Cuts Open | Merzbow, Mats Gustafsson & Balázs Pándi | | 3 |
| 2021 | Shadows of Tomorrow b/w The Brain Produces Electrical Waves | Mats Gustafsson & Joachim Nordwall | | 1 |
| 2021 | Born Without Word / At A Worn | Thurston Moore, Mats Gustafsson, Stephen O'Malley | | 1 |
| 2022 | Xylophonen Virtuosen | Jim O'Rourke & Mats Gustafsson | | 1 |
| 2022 | Vertical | Gustafsson / Lugo | | 1 |
| 2022 | Contra Songs | Mats Gustafsson | | 1 |
| 2022 | Hidros 8 - Heal | Mats Gustafsson & NU Ensemble | 1 | 1 |
| 2023 | Their Power Reached Across Space and Time-To Defy Them Was Death-Or Worse | Mats Gustafsson & Joachim Nordwall | | 3 |
| 2024 | Attaining the Supreme | Mats Gustafsson and Joachim Nordwall | | 1 |
| — | Battuto | Corbett, Gustafsson, Kapsalis, Lonberg-Holm | | 1 |
