| 1988 | Lulu | Friedrich Kuhlau; Danish Radio Symphony Orchestra, Michael Schønwandt | | 1 |
| 1990 | The Complete Concertos | Nielsen; Kim Sjøgren, Niels Thomsen, Toke Lund Christiansen, Danish National Radio Symphony Orchestra, Michael Schønwandt | | 1 |
| 1993 | Drot og marsk | Peter Heise; Danish National Radio Symphony Orchestra & Choir, Michael Schønwandt | | 1 |
| 1993 | Violin Concerto No. 2 / 'Dramaphonia' | Poul Ruders; Rebecca Hirsch, Poul Rosenbaum, Copenhagen Collegium Musicum, Michael Schønwandt, Lontano, Odaline de la Martinez | | 1 |
| 1993 | Requiem (Grande messe des morts) | Hector Berlioz; James Wagner, Ernst‐Senff‐Chor, Rundfunkchor Berlin, Berliner Sinfonie Orchester, Michael Schønwandt | | 1 |
| 1994 | Symphonies 1 & 2 | Niels Wilhelm Gade; Collegium Musicum, Michael Schønwandt | | 1 |
| 1994 | Symphonies Nos. 1-3 | Christoph Ernst Friedrich Weyse; Michael Schønwandt & Royal Danish Orchestra | | 1 |
| 1995 | Symphonies Nos. 4 and 5 | Christoph Ernst Friedrich Weyse; Michael Schønwandt & Royal Danish Orchestra | | 1 |
| 1995 | Symphonies Nos. 6 and 7 | Christoph Ernst Friedrich Weyse; Michael Schønwandt & Royal Danish Orchestra | | 1 |
| 1995 | Gurre / Helteliv / Aladdin Overture | Horneman; Guido Päevatalu, The Danish National Radio Symphony Orchestra and Choir, Michael Schønwandt | | 1 |
| 1995 | Violin Concertos | Stravinsky, Schoenberg; Michael Erxleben, Berliner Sinfonie-Orchester, Michael Schønwandt, Claus Peter Flor | | 1 |
| 1997 | The Solar Trilogy | Poul Ruders; Odense Symphony Orchestra, Michael Schønwandt | | 1 |
| 1997 | Ungdom og galskab | Édouard Dupuy; Copenhagen Collegium Musicum, Michael Schønwandt | | 1 |
| 1998 | Vocalises | Natalie Dessay, Berliner Sinfonie-Orchester, Michael Schønwandt | | 2 |
| 1998 | Elverskud / Fruhlings-Phantasie | Niels W. Gade; Susanne Elmark, Anne Margrethe Dahl, Kirsten Dolberg, Guido Paevatalu, Gert Henning-Jensen, Sten Byriel, Elisabeth Westenholz, Tivolis Symfoniorkester, Michael Schønwandt | | 1 |
| 1998 | Overtures | Kuhlau; Danish National Symphony Orchestra, Michael Schønwandt | | 1 |
| 1999 | Symphony No. 2 / Piano Concerto | Poul Ruders; Rolf Hind, The Danish National Radio Symphony Orchestra, Michael Schønwandt, Markus Stenz | | 1 |
| 1999 | Symphony no. 2 "The Four Temperaments" / Symphony no. 3 "Sinfonia espansiva" | Carl Nielsen; Inger Dam-Jensen, Poul Elming, Danish National Symphony Orchestra, Michael Schønwandt | | 3 |
| 1999 | Piano Concertos | Grieg, Kuhlau; Amalie Malling, Danish National Radio Symphony Orchestra, Michael Schønwandt | | 1 |
| 1999 | Salome | Richard Strauss; DR SymfoniOrkestret, Michael Schønwandt | | 1 |
| 2000 | Symphony no. 4 "The Inextinguishable" / Symphony no. 5 | Carl Nielsen; Danish National Radio Symphony Orchestra, Michael Schønwandt | | 2 |
| 2000 | Symphony no. 1 / Symphony no. 6 "Sinfonia semplice" | Carl Nielsen; Danish National Symphony Orchestra, Michael Schønwandt | | 2 |
| 2000 | Tjenerindens Fortælling (The Handmaid's Tale) | Poul Ruders; Marianne Rørholm, Hanne Fischer, Anne Margrethe Dahl, Susanne Resmark, Poul Elming, Aage Haugland, Royal Danish Opera Chorus, Royal Danish Orchestra, Michael Schønwandt | | 1 |
| 2002 | Requiem for Nietzsche | Vagn Holmboe; Helge Rønning, Johan Reuter, The Danish National Radio Symphony Orchestra and Choir, Michael Schønwandt | | 1 |
| 2011 | Moby Dick / Sinfonietta | Bernard Herrmann; Danish National Symphony Orchestra, Danish National Choir, Michael Schønwandt, Richard Edgar‐Wilson, David Wilson-Johnson | | 1 |
| 2013 | Schierbeck: Fête Galante | Poul Schierbeck; Michael Schønwandt | | 1 |
| 2016 | Symphony no. 9 | Paul von Klenau; Danish National Symphony Orchestra and Choir, Michael Schønwandt | | 1 |
| 2018 | Miroir(s) | Elsa Dreisig, Orchestre national de Montpellier Occitanie, Michael Schønwandt | | 1 |
| — | Maskarade | Carl Nielsen; Danish National Symphony, Michael Schønwandt | | 1 |
| — | Piano Concertos Nos. 2, 4 | Ludwig van Beethoven; Elisabeth Westenholz, Copenhagen Collegium Musicum, Michael Schønwandt | | 1 |
