| 1975 | Requiem / Prélude et Fugue sur le nom d'Alain | Duruflé; Choir of St. John’s College, Cambridge, Stephen Cleobury, George Guest | | 1 |
| 1984 | Coronation Mass, K. 317 / Missa Solemnis, K. 337 | Mozart; Margaret Marshall, Ann Murray, Rogers Covey‐Crump, David Wilson-Johnson, King’s College Choir, Cambridge, English Chamber Orchestra, Stephen Cleobury | | 1 |
| 1984 | Miserere | Allegri; King’s College Choir, Cambridge, Stephen Cleobury | | 1 |
| 1985 | Bax: Mater ora filium / I Sing of a Maiden / This Worldes Joie / Finzi: Magnificat / God Is Gone Up / Lo, the Full, Final Sacrifice | Sir Arnold Bax, Gerald Finzi; King's College Choir, Cambridge, Stephen Cleobury | | 1 |
| 1986 | Great European Organs, No. 1: Stephen Cleobury Plays the Organ of King's College, Cambridge | Stephen Cleobury | | 2 |
| 1986 | Dixit Dominus / Beatus vir | Antonio Vivaldi; Choir of King’s College, Cambridge, English Chamber Orchestra & Stephen Cleobury | | 1 |
| 1987 | The Glory of Venice | Giovanni Gabrieli; King’s College Choir, Cambridge, Philip Jones Brass Ensemble, Stephen Cleobury | | 1 |
| 1987 | The Great Service | William Byrd; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 1988 | Dixit Dominus / Laudate pueri Dominum | Georg Friedrich Händel; Choir of King’s College, Cambridge, English Chamber Orchestra, Stephen Cleobury | | 1 |
| 1989 | Requiems | Fauré, Duruflé; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 1989 | Vespers / Ave verum corpus | Mozart; The Hilliard Ensemble, Lynne Dawson, David James, Rogers Covey‐Crump, Paul Hillier, King’s College Choir Cambridge, Cambridge Classical Players & Stephen Cleobury | | 1 |
| 1990 | Quattro pezzi sacri | Giuseppe Verdi; Choir of King’s College, Cambridge, London Philharmonic Orchestra, Stephen Cleobury | | 1 |
| 1990 | Spem in Alium - Lamentations | Thomas Tallis; Stephen Cleobury, King’s College Choir | | 1 |
| 1991 | Bernstein: Chichester Psalms / Copland: In the Beginning | Leonard Bernstein, Aaron Copland; Choir of King's College Cambridge, Stephen Cleobury | | 1 |
| 1991 | Benjamin Britten Carols | Choir of King’s College, Cambridge & Stephen Cleobury | | 1 |
| 1992 | A Celebration of Herbert Howells | Herbert Howells; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 1995 | Ikos | Górecki, Tavener, Pärt; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 1995 | Dixit Dominus / Laudate pueri Dominum / Organ Concerto "The Cuckoo and the Nightingale" | Handel; Choir of King’s College, Cambridge, English Chamber Orchestra, Stephen Cleobury | | 1 |
| 1996 | Miserere: Latin Church Music | Allegri; Westminster Cathedral Choir, King's College Choir, Stephen Cleobury | | 1 |
| 1996 | BBC Music, Volume 4, Number 8: Motets BWV 225 – 230 | Johann Sebastian Bach; BBC Singers, Stephen Cleobury | | 1 |
| 1996 | Three Masses | Orlande de Lassus; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 1997 | Credo | Choir of King’s College Cambridge, Stephen Cleobury | | 1 |
| 1997 | Miserere and Other Spiritual Classics | Allegri; Choir of King’s College, Cambridge, Sir David Willcocks, Stephen Cleobury | | 1 |
| 1998 | Requiem / Veni Sancte Spiritus / What Sweeter Music / Hymn to the Creator of Light / Cantate Domino / Cantus / Te Deum | Rutter; Choir of King’s College, Cambridge, City of London Sinfonia, The Wallace Collection, Stephen Cleobury | | 4 |
| 1998 | The King's Collection | The Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 1999 | Vespers | Rachmaninov; Choir of King’s College, Cambridge, Stephen Cleobury | | 2 |
| 2000 | Evening Services & Anthems | Stanford; Choir of King’s College, Cambridge, John Mark Ainsley, Stephen Cleobury | | 1 |
| 2000 | Israel in Egypt | Georg Friedrich Händel; Ian Bostridge, Michael Chance, Susan Gritton, Stephen Varcoe, Choir of King’s College, Cambridge, The Brandenburg Consort, Stephen Cleobury | | 1 |
| 2001 | A Ceremony of Carols / Rejoice in the Lamb / A Boy Was Born | Benjamin Britten; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 2001 | Coronation Anthems | Handel; Choir of King’s College, Cambridge, Academy of Ancient Music, Stephen Cleobury | | 2 |
| 2001 | Thomas Tallis | Thomas Tallis; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 2002 | Gloria / Magnificat / Dixit Dominus | Vivaldi; Choir of King’s College, Cambridge, Academy of Ancient Music, Stephen Cleobury | | 2 |
| 2003 | Miserere | Allegri, Frescobaldi, Gabrieli, Marenzio, Giovanni Nanino, Ugolini; Choir of King’s College, Cambridge, Stephen Cleobury, David Willcocks | | 1 |
| 2003 | Stabat Mater | Domenico Scarlatti; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 2004 | Heavenly Voices | Cambridge Boys of King's College Choir, Stephen Cleobury | | 2 |
| 2004 | Liturgy of St. John Chrysostom | Rachmaninov; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 2005 | On Christmas Day: New Carols from King's | Choir of King’s College, Cambridge/Stephen Cleobury | | 1 |
| 2005 | One Star, At Last | BBC Singers & Stephen Cleobury | | 1 |
| 2005 | Gloria | Rutter; Choir of King’s College, Cambridge, City of Birmingham Symphony Orchestra, Stephen Cleobury | | 2 |
| 2006 | Ein deutsches Requiem | Johannes Brahms; Choir of King’s College, Cambridge, Stephen Cleobury, Susan Gritton, Hanno Müller‐Brachmann, Evgenia Rubinova, José Gallardo | | 1 |
| 2006 | Music for Queen Mary | Purcell; Choir of King’s College, Cambridge, Stephen Cleobury, Academy of Ancient Music | | 1 |
| 2008 | Vox in rama (Il secondo libro de motetti) | Giaches De Wert; Collegium Regale, Stephen Cleobury | | 1 |
| 2009 | Gregorian Chant from Westminster Cathedral Choir (also from Argentan) | Westminster Cathedral Choir, Stephen Cleobury & Benedictine Nuns of the Abbey of Notre-Dame, d'Argentan | | 1 |
| 2009 | Messiah | Handel; Academy of Ancient Music, Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 2009 | Matthäus Passion | Johann Sebastian Bach; King's College Choir Cambridge, Brandenburg Consort, Stephen Cleobury | | 2 |
| 2013 | The Masterpieces | Benjamin Britten; Peter Pears, Owen Brannigan, Janine Jansen, Benjamin Britten, George Guest, Stephen Cleobury, Norman Del Mar, Paavo Järvi, George Malcolm | | 2 |
| 2013 | Requiem: Realisations | Mozart; Elin Manahan Thomas, Christine Rice, James Gilchrist, Christopher Purves, Academy of Ancient Music, Stephen Cleobury | | 2 |
| 2013 | Choirbook for the Queen | BBC Singers, Stephen Disley & Stephen Cleobury | | 1 |
| 2013 | Saint Nicolas, Hymn to St Cecilia, Rejoice in the Lamb | Benjamin Britten; Choir of King’s College, Cambridge, Stephen Cleobury, Andrew Kennedy, Britten Sinfonia | | 1 |
| 2013 | Saint Nicolas | Benjamin Britten; Andrew Kennedy, Choir of King’s College, Cambridge, Britten Sinfonia, Stephen Cleobury | | 1 |
| 2014 | Strauss: Choral Works | Richard Strauss, Stephen Cleobury, BBC Singers & Choir of King’s College, Cambridge | | 1 |
| 2014 | Requiem / Cantique de Jean Racine / Messe Basse | Fauré; Choir of King’s College, Cambridge, Stephen Cleobury, Gerald Finley, Tom Pickard, Orchestra of the Age of Enlightenment | | 1 |
| 2014 | English Hymn Anthems | The Choir Of King's College, Cambridge, Stephen Cleobury, Alison Balsom | | 1 |
| 2015 | Organ Works | Liszt, Reubke, Mendelssohn; Stephen Cleobury | | 1 |
| 2015 | 1615: Gabrieli in Venice | Giovanni Gabrieli; Choir of King’s College, Cambridge; Stephen Cleobury | | 1 |
| 2016 | Duruflé Requiem, Four Motets, Messe Cum Jubilo | Maurice Duruflé, Stephen Cleobury, Patricia Bardon, Ashley Riches, Orchestra Of The Age Of Enlightenment, Tom Etheridge, Richard Gowers & Choir of King’s College, Cambridge | | 1 |
| 2017 | The King of Instruments: A Voice Reborn | Stephen Cleobury | | 2 |
| 2017 | Vaughan Williams: Dona Nobis Pacem / Bernstein: Chichester Psalms | Benjamin Britten, Leonard Bernstein; Stephen Cleobury, Britten Sinfonia, Choir of King’s College, Cambridge | | 1 |
| 2018 | Motets | William Byrd; Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 2018 | Grier: Lit by Holy Fire (Live) | Stephen Cleobury & Choir of King’s College, Cambridge | | 1 |
| 2018 | 100 Years of Nine Lessons & Carols | Choir of King’s College, Cambridge, Sir David Willcocks, Philip Ledger, Stephen Cleobury | | 2 |
| 2019 | Lassus: Choral Music | Orlande de Lassus, Stephen Cleobury, Christ Church Cathedral Choir, Oxford, Simon Preston & Choir of King’s College, Cambridge | | 1 |
| 2019 | The Music of King's: Choral Favourites from Cambridge | Choir of King’s College, Cambridge, Stephen Cleobury | | 1 |
| 2019 | Cello Concerto / An English Mass | Herbert Howells; Choir of King’s College, Cambridge, Guy Johnston, Britten Sinfonia, Stephen Cleobury, Christopher Seaman | | 1 |
| 2019 | A Festival of Nine Lessons & Carols: The Centenary Service | Stephen Cleobury, Choir of King’s College, Cambridge | | 1 |
| 2020 | St Matthew Passion | Bach; The Choir Of King's College, Cambridge, Academy Of Ancient Music, Sir Stephen Cleobury | | 2 |
| 2020 | Mass in E Minor, Motets | Anton Bruckner; Choir of King’s College, Cambridge, Academy of St Martin in the Fields, Stephen Cleobury | | 2 |
