| 1967 | Symphony no. 4 | Mahler; Elly Ameling, Koninklijk Concertgebouworkest, Bernard Haitink | | 3 |
| 1969 | Magnificat in D major / Cantata no. 10 | Bach; Ameling, Van Bork, Watts, Krenn, Rintzler, Krause, Wiener Akademiechor, Stuttgart Chamber Orchestra, Karl Münchinger | | 1 |
| 1970 | 4 Missae Breves | Johann Sebastian Bach; Elly Ameling, Agnes Giebel, Birgit Finnilä, Gisela Litz, Hermann Prey, Theo Altmeyer, William Reimer, Helmut Winschermann, Kurt Redel | | 2 |
| 1974 | Schumann: Frauenliebe- und Leben / Schubert: Lieder für Gretchen, Ellen und Suleika | Schumann, Schubert; Elly Ameling, Dalton Baldwin | | 2 |
| 1976 | Messiah | Handel; Ameling, Reynolds, Langridge, Howell, Neville Marriner | | 5 |
| 1980 | La Bonne Chanson / Chansons de Bilitis / Ariettes oubliées | Fauré, Debussy; Elly Ameling, Dalton Baldwin | | 1 |
| 1982 | Lieder | Mendelssohn; Elly Ameling, Rudolf Jansen | | 1 |
| 1982 | Ravel: Shéhérazade / Debussy: La Damoiselle élue | Ravel, Debussy; Elly Ameling, San Francisco Symphony, Edo de Waart | | 1 |
| 1984 | Peer Gynt | Grieg; Elly Ameling, San Francisco Symphony & Chorus, Edo de Waart | | 1 |
| 1985 | Rosamunde | Franz Schubert;Elly Ameling, Gewandhausorchester Leipzig,Kurt Masur | | 1 |
| 1987 | Requiem / "Pelléas et Mélisande" / Pavane | Gabriel Fauré; Elly Ameling, Bernard Kruysen, Jill Gomez, Rotterdam Philharmonic Orchestra & Jean Fournet, David Zinman | 4 | 4 |
| 1988 | Weihnachts‐Oratorium | Bach; Elly Ameling, Brigitte Fassbaender, Horst R. Laubenthal, Hermann Prey, Chor des Bayerischen Rundfunks, Symphonie-Orchester des Bayerischen Rundfunks, Eugen Jochum | | 2 |
| 1989 | Requiem | Domenico Cimarosa: Orchestre de Chambre de Lausanne, Vittorio Negri, Elly Ameling, Birgit Finnilä, Kurt Widmer | | 1 |
| 1990 | The Hyperion Schubert Edition, Volume 7: Schubert in 1815 I | Franz Schubert; Elly Ameling, Graham Johnson | | 1 |
| 1990 | Bauern-Kantate / Kaffee-Kantate / Hochzeitskantate / Non Sà Che Sia Dolore | Johann Sebastian Bach, Elly Ameling, Gerald English, Siegmund Nimsgern & Collegium Aureum | | 1 |
| 1990 | Die Schöpfung | Haydn; Ameling, Krenn, Krause, Karl Münchinger | | 1 |
| 1990 | Lieder: Ave Maria, etc. | Franz Schubert; Elly Ameling, Dalton Baldwin | 5 | 1 |
| 1990 | Lieder | Schubert, Schumann; Elly Ameling, Jörg Demus | | 1 |
| 1991 | Mélodies | Debussy; Elly Ameling, Mady Mesplé, Michèle Command, Frederica von Stade, Gérard Souzay, Dalton Baldwin | | 1 |
| 1991 | Songs by Brahms | Brahms; Elly Ameling, Rudolf Jansen | | 1 |
| 1992 | In De Grote Kerk Te Monnickendam | Thijs Van Leer en Elly Ameling | | 1 |
| 1992 | Symphony No. 4 | Mahler; Elly Ameling, Concertgebouw Orchestra, Bernard Haitink | | 1 |
| 1993 | Elias | Mendelssohn; Adam, Ameling, Burmeister, Schreier, Rundfunkchor Leipzig, Gewandhausorchester Leipzig, Wolfgang Sawallisch | | 4 |
| 1995 | Requiem | W.A. Mozart; E. Ameling, B. Scherler, L. Devos, R. Soyer, Chœur Symphonique et Orchestre de la Fondation Gulbenkian de Lisbonne, Michel Corboz | | 3 |
| 1996 | Weihnachts-Oratorium | Johann Sebastian Bach; Academy of St Martin in the Fields, Philip Ledger, Elly Ameling, Dietrich Fischer‐Dieskau, Janet Baker, Robert Tear, King’s College Choir, Cambridge | | 1 |
| 1997 | Johann Sebastian Bach - Christmas Oratorio (Highlights) - BWV 248 | Elly Ameling, Brigitte Fassbaender, Horst Laubenthal, Hermann Prey, Symphonieorchester des Bayerischen Rundfunks & Chor des Bayerischen Rundfunks | | 1 |
| 2000 | Symphony no. 4 / Lieder eines fahrenden Gesellen / Das irdische Leben / Wer hat dies Liedlein erdacht? | Mahler; Joan Carlyle, Anna Reynolds, Elly Ameling, London Symphony Orchestra, English Chamber Orchestra, Benjamin Britten | | 1 |
| 2001 | Johannes-Passion | Johann Sebastian Bach; Elly Ameling, Julia Hamari, Werner Hollweg, Hermann Prey, Walter Berry, Stuttgarter Hymnus-Chorknaben, Stuttgarter Kammerorchester, Karl Münchinger | | 1 |
| 2002 | Duette · Terzette · Quartette | Franz Schubert; Elly Ameling, Janet Baker, Dietrich Fischer‐Dieskau, Horst R. Laubenthal, Peter Schreier, Gerald Moore | | 1 |
| 2003 | Juditha Triumphans | Antonio Vivaldi; Elly Ameling, Julia Hamari, Birgit Finnilä, Ingeborg Springer, Annelies Burmeister, Kammerorchester Berlin, Vittorio Negri | | 1 |
| 2005 | Mélodies/Lieder | Fauré; Elly Ameling, Gérard Souzay | | 1 |
| 2005 | St Matthew Passion: Arias, Recitatives and Choruses | J. S. Bach; Ameling, Baker | | 1 |
| — | On Wings of Song | Beethoven, Brahms, Chopin, Massenet, Mendelssohn, Ravel, Schubert, Schumann, Tchaikovsky; Elly Ameling, Rudolf Jansen | | 1 |
| — | Symphony no. 2 / Wunderhorn-Lieder | Mahler; Elly Ameling, Aafje Heynis, Jessye Norman, John Shirley‐Quirk, Concertgebouw Orchetra, Amsterdam, Bernard Haitink | | 1 |
